Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cpsf4Q8BQZ5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf4Q8BQZ5 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.82■□□□□ 0.6
Cpsf4Q8BQZ5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Cpsf4Q8BQZ5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4Q8BQZ5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4Q8BQZ5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cpsf4Q8BQZ5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cpsf4Q8BQZ5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cpsf4Q8BQZ5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cpsf4Q8BQZ5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Gm6139-201ENSMUST00000079261 882 ntBASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.78■□□□□ 0.6
Cpsf4Q8BQZ5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Gm12251-201ENSMUST00000117893 792 ntBASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Mir7075-201ENSMUST00000184187 82 ntBASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Mir6236-201ENSMUST00000184437 123 ntBASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf4Q8BQZ5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.77■□□□□ 0.59
Cpsf4Q8BQZ5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Serp2-204ENSMUST00000228055 705 ntBASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf4Q8BQZ5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf4Q8BQZ5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Cpsf4Q8BQZ5 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.75■□□□□ 0.59
Cpsf4Q8BQZ5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf4Q8BQZ5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf4Q8BQZ5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cpsf4Q8BQZ5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf4Q8BQZ5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms