Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp2bQ8BJF9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Chmp2bQ8BJF9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp2bQ8BJF9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp2bQ8BJF9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp2bQ8BJF9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp2bQ8BJF9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Chmp2bQ8BJF9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp2bQ8BJF9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.79■□□□□ 0.76
Chmp2bQ8BJF9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp2bQ8BJF9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp2bQ8BJF9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp2bQ8BJF9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Chmp2bQ8BJF9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp2bQ8BJF9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms