Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TUBA1AQ71U36 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 AC004448.1-201ENST00000458332 883 ntBASIC20.08■□□□□ 0.81
TUBA1AQ71U36 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.08■□□□□ 0.81
TUBA1AQ71U36 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TUBA1AQ71U36 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 AC073130.3-201ENST00000624389 2278 ntBASIC20.06■□□□□ 0.8
TUBA1AQ71U36 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 AC139530.1-201ENST00000575312 1977 ntBASIC20.06■□□□□ 0.8
TUBA1AQ71U36 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
TUBA1AQ71U36 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 AL161729.1-201ENST00000604104 1402 ntBASIC20.05■□□□□ 0.8
TUBA1AQ71U36 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.05■□□□□ 0.8
TUBA1AQ71U36 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 AC131212.1-201ENST00000613771 668 ntBASIC20.04■□□□□ 0.8
TUBA1AQ71U36 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.04■□□□□ 0.8
TUBA1AQ71U36 AC026310.3-201ENST00000625186 2373 ntBASIC20.03■□□□□ 0.8
TUBA1AQ71U36 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TUBA1AQ71U36 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TUBA1AQ71U36 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms