Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.61■□□□□ 0.73
Col12a1Q60847 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.61■□□□□ 0.73
Col12a1Q60847 Gm11249-201ENSMUST00000117071 859 ntBASIC19.6■□□□□ 0.73
Col12a1Q60847 Gm6433-201ENSMUST00000118634 875 ntBASIC19.6■□□□□ 0.73
Col12a1Q60847 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col12a1Q60847 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col12a1Q60847 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.6■□□□□ 0.73
Col12a1Q60847 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col12a1Q60847 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col12a1Q60847 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col12a1Q60847 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col12a1Q60847 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col12a1Q60847 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col12a1Q60847 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col12a1Q60847 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.59■□□□□ 0.73
Col12a1Q60847 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col12a1Q60847 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col12a1Q60847 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col12a1Q60847 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.59■□□□□ 0.73
Col12a1Q60847 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.59■□□□□ 0.73
Col12a1Q60847 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col12a1Q60847 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Col12a1Q60847 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col12a1Q60847 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col12a1Q60847 Gm12896-201ENSMUST00000118430 226 ntBASIC19.58■□□□□ 0.72
Col12a1Q60847 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col12a1Q60847 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col12a1Q60847 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col12a1Q60847 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.57■□□□□ 0.72
Col12a1Q60847 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.57■□□□□ 0.72
Col12a1Q60847 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col12a1Q60847 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col12a1Q60847 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.56■□□□□ 0.72
Col12a1Q60847 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.56■□□□□ 0.72
Col12a1Q60847 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.56■□□□□ 0.72
Col12a1Q60847 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Col12a1Q60847 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col12a1Q60847 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col12a1Q60847 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col12a1Q60847 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col12a1Q60847 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.55■□□□□ 0.72
Col12a1Q60847 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col12a1Q60847 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col12a1Q60847 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col12a1Q60847 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Col12a1Q60847 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.55■□□□□ 0.72
Col12a1Q60847 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col12a1Q60847 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Col12a1Q60847 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Col12a1Q60847 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col12a1Q60847 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col12a1Q60847 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col12a1Q60847 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col12a1Q60847 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col12a1Q60847 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Col12a1Q60847 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col12a1Q60847 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Col12a1Q60847 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col12a1Q60847 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col12a1Q60847 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col12a1Q60847 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col12a1Q60847 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.52■□□□□ 0.72
Col12a1Q60847 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col12a1Q60847 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col12a1Q60847 Rab3c-203ENSMUST00000224180 967 ntBASIC19.52■□□□□ 0.72
Col12a1Q60847 Gm10231-201ENSMUST00000181584 441 ntBASIC19.52■□□□□ 0.72
Col12a1Q60847 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col12a1Q60847 Gm10175-202ENSMUST00000208752 441 ntBASIC19.52■□□□□ 0.72
Col12a1Q60847 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col12a1Q60847 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.51■□□□□ 0.71
Col12a1Q60847 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.51■□□□□ 0.71
Col12a1Q60847 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Col12a1Q60847 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.51■□□□□ 0.71
Col12a1Q60847 Gm21362-201ENSMUST00000194272 928 ntBASIC19.51■□□□□ 0.71
Col12a1Q60847 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Col12a1Q60847 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
Col12a1Q60847 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col12a1Q60847 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col12a1Q60847 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col12a1Q60847 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col12a1Q60847 Gm10698-201ENSMUST00000182663 604 ntBASIC19.51■□□□□ 0.71
Col12a1Q60847 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col12a1Q60847 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col12a1Q60847 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Col12a1Q60847 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms