Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.39□□□□□ -0.11
Trav7-2Q5R1I3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav7-2Q5R1I3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Golgb1-201ENSMUST00000023534 498 ntBASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav7-2Q5R1I3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Gm9847-201ENSMUST00000052528 599 ntBASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav7-2Q5R1I3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav7-2Q5R1I3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms