Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.08■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav15-1-dv6-1Q5R1D2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.05■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15-1-dv6-1Q5R1D2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav15-1-dv6-1Q5R1D2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms