Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Gm16437-201ENSMUST00000025669 507 ntBASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3-3Q5R1C3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3-3Q5R1C3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.55□□□□□ -0.08
Trav3-3Q5R1C3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3-3Q5R1C3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav3-3Q5R1C3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav3-3Q5R1C3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3-3Q5R1C3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3-3Q5R1C3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms