Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Bbof1Q3V079 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Mir7075-201ENSMUST00000184187 82 ntBASIC21.22■□□□□ 0.99
Bbof1Q3V079 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Bbof1Q3V079 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Bbof1Q3V079 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.21■□□□□ 0.99
Bbof1Q3V079 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.21■□□□□ 0.99
Bbof1Q3V079 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Bbof1Q3V079 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.2■□□□□ 0.98
Bbof1Q3V079 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Bbof1Q3V079 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bbof1Q3V079 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.18■□□□□ 0.98
Bbof1Q3V079 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.18■□□□□ 0.98
Bbof1Q3V079 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.18■□□□□ 0.98
Bbof1Q3V079 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bbof1Q3V079 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Gm15039-201ENSMUST00000118914 875 ntBASIC21.17■□□□□ 0.98
Bbof1Q3V079 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Bbof1Q3V079 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bbof1Q3V079 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bbof1Q3V079 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bbof1Q3V079 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Bbof1Q3V079 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Bbof1Q3V079 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bbof1Q3V079 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.15■□□□□ 0.98
Bbof1Q3V079 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bbof1Q3V079 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bbof1Q3V079 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bbof1Q3V079 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Bbof1Q3V079 Gm8493-201ENSMUST00000196881 489 ntBASIC21.15■□□□□ 0.98
Bbof1Q3V079 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bbof1Q3V079 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bbof1Q3V079 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Bbof1Q3V079 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bbof1Q3V079 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bbof1Q3V079 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bbof1Q3V079 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms