Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Gm15546-201ENSMUST00000122095 826 ntBASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Gm5812-201ENSMUST00000061073 957 ntBASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pfdn4Q3UWL8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.98■□□□□ 0.63
Pfdn4Q3UWL8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pfdn4Q3UWL8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pfdn4Q3UWL8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pfdn4Q3UWL8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pfdn4Q3UWL8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pfdn4Q3UWL8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Etf1-202ENSMUST00000180351 108 ntBASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pfdn4Q3UWL8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pfdn4Q3UWL8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms