Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fam196aQ3USH1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.67■□□□□ 0.74
Fam196aQ3USH1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fam196aQ3USH1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fam196aQ3USH1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Fam196aQ3USH1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam196aQ3USH1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fam196aQ3USH1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Fam196aQ3USH1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Fam196aQ3USH1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fam196aQ3USH1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Fam196aQ3USH1 Gm37055-201ENSMUST00000191866 133 ntBASIC19.63■□□□□ 0.73
Fam196aQ3USH1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fam196aQ3USH1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fam196aQ3USH1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Fam196aQ3USH1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Fam196aQ3USH1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Gm9987-201ENSMUST00000069768 567 ntBASIC19.61■□□□□ 0.73
Fam196aQ3USH1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Fam196aQ3USH1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fam196aQ3USH1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Fam196aQ3USH1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Fam196aQ3USH1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Fam196aQ3USH1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fam196aQ3USH1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Fam196aQ3USH1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fam196aQ3USH1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Fam196aQ3USH1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Fam196aQ3USH1 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.58■□□□□ 0.73
Fam196aQ3USH1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fam196aQ3USH1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Fam196aQ3USH1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Fam196aQ3USH1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.58■□□□□ 0.72
Fam196aQ3USH1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Fam196aQ3USH1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.58■□□□□ 0.72
Fam196aQ3USH1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fam196aQ3USH1 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.58■□□□□ 0.72
Fam196aQ3USH1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Fam196aQ3USH1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Fam196aQ3USH1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms