Protein–RNA interactions for Protein: Q3U2C5

Rnf149, E3 ubiquitin-protein ligase RNF149, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf149Q3U2C5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Gm22238-201ENSMUST00000175222 88 ntBASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf149Q3U2C5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf149Q3U2C5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf149Q3U2C5 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rnf149Q3U2C5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf149Q3U2C5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf149Q3U2C5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf149Q3U2C5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf149Q3U2C5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.33■□□□□ 0.37
Rnf149Q3U2C5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.33■□□□□ 0.37
Rnf149Q3U2C5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf149Q3U2C5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf149Q3U2C5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.31■□□□□ 0.36
Rnf149Q3U2C5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms