Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cbx1P83917 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cbx1P83917 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cbx1P83917 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.72■□□□□ 0.91
Cbx1P83917 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.71■□□□□ 0.91
Cbx1P83917 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.71■□□□□ 0.91
Cbx1P83917 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.71■□□□□ 0.91
Cbx1P83917 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cbx1P83917 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.71■□□□□ 0.91
Cbx1P83917 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cbx1P83917 BC021767-201ENSMUST00000126387 1716 ntBASIC20.7■□□□□ 0.9
Cbx1P83917 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx1P83917 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cbx1P83917 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.7■□□□□ 0.9
Cbx1P83917 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx1P83917 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx1P83917 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx1P83917 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.7■□□□□ 0.9
Cbx1P83917 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cbx1P83917 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cbx1P83917 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cbx1P83917 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cbx1P83917 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.69■□□□□ 0.9
Cbx1P83917 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cbx1P83917 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Cbx1P83917 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cbx1P83917 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx1P83917 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx1P83917 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx1P83917 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx1P83917 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cbx1P83917 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx1P83917 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cbx1P83917 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cbx1P83917 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.67■□□□□ 0.9
Cbx1P83917 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cbx1P83917 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cbx1P83917 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cbx1P83917 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cbx1P83917 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cbx1P83917 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.66■□□□□ 0.9
Cbx1P83917 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Cbx1P83917 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cbx1P83917 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cbx1P83917 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.65■□□□□ 0.9
Cbx1P83917 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cbx1P83917 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.65■□□□□ 0.9
Cbx1P83917 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cbx1P83917 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms