Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SgcaP82350 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.25■□□□□ 0.19
SgcaP82350 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.25■□□□□ 0.19
SgcaP82350 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.25■□□□□ 0.19
SgcaP82350 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SgcaP82350 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.25■□□□□ 0.19
SgcaP82350 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SgcaP82350 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SgcaP82350 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SgcaP82350 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.24■□□□□ 0.19
SgcaP82350 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.24■□□□□ 0.19
SgcaP82350 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.24■□□□□ 0.19
SgcaP82350 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.24■□□□□ 0.19
SgcaP82350 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SgcaP82350 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SgcaP82350 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.23■□□□□ 0.19
SgcaP82350 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.23■□□□□ 0.19
SgcaP82350 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SgcaP82350 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SgcaP82350 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SgcaP82350 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SgcaP82350 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SgcaP82350 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SgcaP82350 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SgcaP82350 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.21■□□□□ 0.19
SgcaP82350 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SgcaP82350 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SgcaP82350 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SgcaP82350 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
SgcaP82350 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.21■□□□□ 0.18
SgcaP82350 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SgcaP82350 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SgcaP82350 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcaP82350 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.2■□□□□ 0.18
SgcaP82350 Mir6538-201ENSMUST00000183713 110 ntBASIC16.2■□□□□ 0.18
SgcaP82350 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
SgcaP82350 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcaP82350 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SgcaP82350 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcaP82350 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcaP82350 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SgcaP82350 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.19■□□□□ 0.18
SgcaP82350 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SgcaP82350 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SgcaP82350 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SgcaP82350 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SgcaP82350 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SgcaP82350 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms