Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SqleP52019 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SqleP52019 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.28■■□□□ 1
SqleP52019 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.28■■□□□ 1
SqleP52019 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.28■■□□□ 1
SqleP52019 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SqleP52019 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SqleP52019 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
SqleP52019 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.27■■□□□ 1
SqleP52019 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.27■■□□□ 1
SqleP52019 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.27■■□□□ 1
SqleP52019 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SqleP52019 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SqleP52019 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SqleP52019 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SqleP52019 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SqleP52019 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SqleP52019 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.26■□□□□ 0.99
SqleP52019 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SqleP52019 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SqleP52019 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SqleP52019 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SqleP52019 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SqleP52019 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SqleP52019 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.25■□□□□ 0.99
SqleP52019 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.25■□□□□ 0.99
SqleP52019 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.25■□□□□ 0.99
SqleP52019 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SqleP52019 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.25■□□□□ 0.99
SqleP52019 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SqleP52019 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SqleP52019 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.24■□□□□ 0.99
SqleP52019 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SqleP52019 Gm2559-201ENSMUST00000201323 363 ntBASIC21.24■□□□□ 0.99
SqleP52019 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SqleP52019 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SqleP52019 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SqleP52019 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SqleP52019 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SqleP52019 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SqleP52019 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SqleP52019 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.23■□□□□ 0.99
SqleP52019 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SqleP52019 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
SqleP52019 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SqleP52019 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SqleP52019 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SqleP52019 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.23■□□□□ 0.99
SqleP52019 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SqleP52019 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SqleP52019 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SqleP52019 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
SqleP52019 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SqleP52019 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SqleP52019 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SqleP52019 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SqleP52019 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SqleP52019 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.21■□□□□ 0.99
SqleP52019 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SqleP52019 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SqleP52019 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SqleP52019 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SqleP52019 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SqleP52019 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SqleP52019 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.2■□□□□ 0.98
SqleP52019 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SqleP52019 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SqleP52019 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SqleP52019 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SqleP52019 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SqleP52019 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.19■□□□□ 0.98
SqleP52019 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SqleP52019 Gm37055-201ENSMUST00000191866 133 ntBASIC21.19■□□□□ 0.98
SqleP52019 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.19■□□□□ 0.98
SqleP52019 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SqleP52019 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms