Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.98■□□□□ 0.15
Hist1h1aP43275 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Hist1h1aP43275 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Hist1h1aP43275 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hist1h1aP43275 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Hist1h1aP43275 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hist1h1aP43275 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Hist1h1aP43275 Mir6236-201ENSMUST00000184437 123 ntBASIC15.97■□□□□ 0.15
Hist1h1aP43275 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.97■□□□□ 0.15
Hist1h1aP43275 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.97■□□□□ 0.15
Hist1h1aP43275 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Hist1h1aP43275 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hist1h1aP43275 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Hist1h1aP43275 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Hist1h1aP43275 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.94■□□□□ 0.14
Hist1h1aP43275 Gm43530-201ENSMUST00000195920 274 ntBASIC15.94■□□□□ 0.14
Hist1h1aP43275 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Gm9870-201ENSMUST00000063874 645 ntBASIC15.94■□□□□ 0.14
Hist1h1aP43275 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hist1h1aP43275 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Gm7417-201ENSMUST00000192950 473 ntBASIC15.93■□□□□ 0.14
Hist1h1aP43275 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hist1h1aP43275 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hist1h1aP43275 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms