Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.25■□□□□ 0.19
Mmp9P41245 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp9P41245 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.25■□□□□ 0.19
Mmp9P41245 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp9P41245 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp9P41245 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp9P41245 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp9P41245 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp9P41245 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp9P41245 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp9P41245 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.24■□□□□ 0.19
Mmp9P41245 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp9P41245 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Mmp9P41245 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Mmp9P41245 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Gm13238-201ENSMUST00000117655 780 ntBASIC16.23■□□□□ 0.19
Mmp9P41245 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
Mmp9P41245 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Mmp9P41245 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.23■□□□□ 0.19
Mmp9P41245 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Mmp9P41245 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Mmp9P41245 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.22■□□□□ 0.19
Mmp9P41245 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.22■□□□□ 0.19
Mmp9P41245 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Mmp9P41245 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Mmp9P41245 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Gm45444-201ENSMUST00000211394 898 ntBASIC16.21■□□□□ 0.19
Mmp9P41245 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Mmp9P41245 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.21■□□□□ 0.19
Mmp9P41245 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.21■□□□□ 0.19
Mmp9P41245 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Mmp9P41245 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.21■□□□□ 0.19
Mmp9P41245 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp9P41245 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp9P41245 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Mmp9P41245 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
Mmp9P41245 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.2■□□□□ 0.18
Mmp9P41245 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.2■□□□□ 0.18
Mmp9P41245 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.2■□□□□ 0.18
Mmp9P41245 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp9P41245 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Gm9959-201ENSMUST00000068277 390 ntBASIC16.2■□□□□ 0.18
Mmp9P41245 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp9P41245 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Mmp9P41245 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp9P41245 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.19■□□□□ 0.18
Mmp9P41245 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp9P41245 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms