Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC087239.1-201ENST00000622671 572 ntBASIC27.29■■□□□ 1.96
COL11A2P13942 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.29■■□□□ 1.96
COL11A2P13942 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 KRT87P-202ENST00000534226 1464 ntBASIC27.29■■□□□ 1.96
COL11A2P13942 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
COL11A2P13942 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.28■■□□□ 1.96
COL11A2P13942 TSPY20P-201ENST00000450910 630 ntBASIC27.28■■□□□ 1.96
COL11A2P13942 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.28■■□□□ 1.96
COL11A2P13942 DUX4L16-201ENST00000555130 1264 ntBASIC27.28■■□□□ 1.96
COL11A2P13942 AC068587.7-201ENST00000641602 218 ntBASIC27.28■■□□□ 1.96
COL11A2P13942 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
COL11A2P13942 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.27■■□□□ 1.96
COL11A2P13942 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A2P13942 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A2P13942 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A2P13942 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
COL11A2P13942 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A2P13942 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A2P13942 AL138781.1-201ENST00000566567 1274 ntBASIC27.27■■□□□ 1.96
COL11A2P13942 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
COL11A2P13942 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
COL11A2P13942 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.96
COL11A2P13942 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL11A2P13942 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL11A2P13942 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL11A2P13942 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL11A2P13942 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.26■■□□□ 1.95
COL11A2P13942 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.26■■□□□ 1.95
COL11A2P13942 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.26■■□□□ 1.95
COL11A2P13942 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL11A2P13942 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
COL11A2P13942 TSPY6P-201ENST00000448518 926 ntBASIC27.25■■□□□ 1.95
COL11A2P13942 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A2P13942 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A2P13942 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.25■■□□□ 1.95
COL11A2P13942 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A2P13942 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL11A2P13942 AC010141.3-201ENST00000456659 717 ntBASIC27.24■■□□□ 1.95
COL11A2P13942 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A2P13942 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.24■■□□□ 1.95
COL11A2P13942 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A2P13942 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A2P13942 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.24■■□□□ 1.95
COL11A2P13942 AL121832.2-201ENST00000610979 668 ntBASIC27.24■■□□□ 1.95
COL11A2P13942 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.24■■□□□ 1.95
COL11A2P13942 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A2P13942 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A2P13942 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL11A2P13942 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.24■■□□□ 1.95
COL11A2P13942 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.24■■□□□ 1.95
COL11A2P13942 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL11A2P13942 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.23■■□□□ 1.95
COL11A2P13942 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL11A2P13942 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL11A2P13942 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL11A2P13942 AC005224.4-201ENST00000583262 1652 ntBASIC27.23■■□□□ 1.95
COL11A2P13942 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL11A2P13942 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.22■■□□□ 1.95
COL11A2P13942 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.22■■□□□ 1.95
COL11A2P13942 AC069152.1-201ENST00000438030 544 ntBASIC27.22■■□□□ 1.95
COL11A2P13942 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.22■■□□□ 1.95
COL11A2P13942 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL11A2P13942 AC138932.3-201ENST00000567634 1902 ntBASIC27.22■■□□□ 1.95
COL11A2P13942 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL11A2P13942 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL11A2P13942 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL11A2P13942 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A2P13942 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
COL11A2P13942 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.21■■□□□ 1.95
COL11A2P13942 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A2P13942 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A2P13942 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
COL11A2P13942 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
COL11A2P13942 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A2P13942 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A2P13942 CNN2P6-201ENST00000439038 900 ntBASIC27.21■■□□□ 1.95
COL11A2P13942 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.21■■□□□ 1.95
COL11A2P13942 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.21■■□□□ 1.95
COL11A2P13942 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL11A2P13942 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
COL11A2P13942 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL11A2P13942 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL11A2P13942 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
COL11A2P13942 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL11A2P13942 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.2■■□□□ 1.95
COL11A2P13942 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.2■■□□□ 1.94
COL11A2P13942 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.2■■□□□ 1.94
COL11A2P13942 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.2■■□□□ 1.94
COL11A2P13942 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL11A2P13942 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL11A2P13942 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A2P13942 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.19■■□□□ 1.94
COL11A2P13942 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
COL11A2P13942 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.19■■□□□ 1.94
COL11A2P13942 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.19■■□□□ 1.94
COL11A2P13942 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL11A2P13942 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.19■■□□□ 1.94
COL11A2P13942 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.19■■□□□ 1.94
COL11A2P13942 AC231657.2-201ENST00000624556 255 ntBASIC27.19■■□□□ 1.94
COL11A2P13942 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms