Protein–RNA interactions for Protein: P10400

Pol, Retrovirus-related Pol polyprotein (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PolP10400 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.06□□□□□ -0.16
PolP10400 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.06□□□□□ -0.16
PolP10400 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PolP10400 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.05□□□□□ -0.16
PolP10400 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.05□□□□□ -0.16
PolP10400 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.05□□□□□ -0.16
PolP10400 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PolP10400 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PolP10400 Rarb-207ENSMUST00000225921 2756 ntBASIC14.05□□□□□ -0.16
PolP10400 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PolP10400 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PolP10400 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PolP10400 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Etf1-202ENSMUST00000180351 108 ntBASIC14.04□□□□□ -0.16
PolP10400 Gm40881-201ENSMUST00000223397 166 ntBASIC14.04□□□□□ -0.16
PolP10400 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PolP10400 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PolP10400 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PolP10400 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PolP10400 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PolP10400 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.03□□□□□ -0.16
PolP10400 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.03□□□□□ -0.16
PolP10400 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.03□□□□□ -0.16
PolP10400 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.03□□□□□ -0.16
PolP10400 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PolP10400 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PolP10400 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PolP10400 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PolP10400 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PolP10400 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PolP10400 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PolP10400 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
PolP10400 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PolP10400 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PolP10400 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PolP10400 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PolP10400 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PolP10400 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PolP10400 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PolP10400 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PolP10400 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PolP10400 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.01□□□□□ -0.17
PolP10400 Gm7417-201ENSMUST00000192950 473 ntBASIC14.01□□□□□ -0.17
PolP10400 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.01□□□□□ -0.17
PolP10400 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms