Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Rc3h2P0C090 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rc3h2P0C090 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h2P0C090 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rc3h2P0C090 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Rc3h2P0C090 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h2P0C090 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rc3h2P0C090 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.82■□□□□ 0.76
Rc3h2P0C090 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rc3h2P0C090 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.82■□□□□ 0.76
Rc3h2P0C090 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rc3h2P0C090 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h2P0C090 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.81■□□□□ 0.76
Rc3h2P0C090 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h2P0C090 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h2P0C090 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h2P0C090 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rc3h2P0C090 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rc3h2P0C090 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.8■□□□□ 0.76
Rc3h2P0C090 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Gm7514-201ENSMUST00000209475 934 ntBASIC19.8■□□□□ 0.76
Rc3h2P0C090 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.8■□□□□ 0.76
Rc3h2P0C090 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.8■□□□□ 0.76
Rc3h2P0C090 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rc3h2P0C090 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.79■□□□□ 0.76
Rc3h2P0C090 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rc3h2P0C090 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Notumos-201ENSMUST00000151998 2659 ntBASIC19.78■□□□□ 0.76
Rc3h2P0C090 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.78■□□□□ 0.76
Rc3h2P0C090 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.78■□□□□ 0.76
Rc3h2P0C090 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.77■□□□□ 0.76
Rc3h2P0C090 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rc3h2P0C090 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h2P0C090 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rc3h2P0C090 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.77■□□□□ 0.76
Rc3h2P0C090 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rc3h2P0C090 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.76■□□□□ 0.75
Rc3h2P0C090 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.76■□□□□ 0.75
Rc3h2P0C090 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Gm10602-201ENSMUST00000098239 609 ntBASIC19.76■□□□□ 0.75
Rc3h2P0C090 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rc3h2P0C090 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.75■□□□□ 0.75
Rc3h2P0C090 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Gm12933-201ENSMUST00000120203 872 ntBASIC19.75■□□□□ 0.75
Rc3h2P0C090 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
Rc3h2P0C090 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h2P0C090 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h2P0C090 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rc3h2P0C090 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms