Protein–RNA interactions for Protein: P09055

Itgb1, Integrin beta-1, mousemouse

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb1P09055 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Itgb1P09055 Gm38205-201ENSMUST00000192243 258 ntBASIC20.47■□□□□ 0.87
Itgb1P09055 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Itgb1P09055 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Itgb1P09055 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Itgb1P09055 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Itgb1P09055 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.46■□□□□ 0.87
Itgb1P09055 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Gm13146-201ENSMUST00000118508 780 ntBASIC20.46■□□□□ 0.87
Itgb1P09055 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.46■□□□□ 0.87
Itgb1P09055 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.46■□□□□ 0.87
Itgb1P09055 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.46■□□□□ 0.87
Itgb1P09055 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Itgb1P09055 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.46■□□□□ 0.87
Itgb1P09055 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.46■□□□□ 0.87
Itgb1P09055 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Itgb1P09055 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Itgb1P09055 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Itgb1P09055 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Itgb1P09055 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Itgb1P09055 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Itgb1P09055 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 Gm22240-201ENSMUST00000175225 82 ntBASIC20.44■□□□□ 0.86
Itgb1P09055 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.44■□□□□ 0.86
Itgb1P09055 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.44■□□□□ 0.86
Itgb1P09055 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Itgb1P09055 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Itgb1P09055 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Itgb1P09055 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Itgb1P09055 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Itgb1P09055 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.43■□□□□ 0.86
Itgb1P09055 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.43■□□□□ 0.86
Itgb1P09055 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.43■□□□□ 0.86
Itgb1P09055 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Itgb1P09055 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.43■□□□□ 0.86
Itgb1P09055 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Itgb1P09055 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Itgb1P09055 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Itgb1P09055 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.42■□□□□ 0.86
Itgb1P09055 Gm20760-201ENSMUST00000179197 648 ntBASIC20.42■□□□□ 0.86
Itgb1P09055 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.42■□□□□ 0.86
Itgb1P09055 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.42■□□□□ 0.86
Itgb1P09055 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Itgb1P09055 AA386476-201ENSMUST00000098781 1665 ntBASIC20.42■□□□□ 0.86
Itgb1P09055 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Itgb1P09055 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Itgb1P09055 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Itgb1P09055 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Itgb1P09055 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.41■□□□□ 0.86
Itgb1P09055 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Itgb1P09055 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Itgb1P09055 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Itgb1P09055 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Itgb1P09055 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.4■□□□□ 0.86
Itgb1P09055 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Itgb1P09055 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Itgb1P09055 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.4■□□□□ 0.86
Itgb1P09055 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Itgb1P09055 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Itgb1P09055 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Itgb1P09055 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.39■□□□□ 0.86
Itgb1P09055 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.39■□□□□ 0.86
Itgb1P09055 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Itgb1P09055 Gm12527-201ENSMUST00000117967 564 ntBASIC20.39■□□□□ 0.85
Itgb1P09055 Gm10252-201ENSMUST00000209541 832 ntBASIC20.39■□□□□ 0.85
Itgb1P09055 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Itgb1P09055 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Itgb1P09055 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Itgb1P09055 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Itgb1P09055 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Itgb1P09055 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Itgb1P09055 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Itgb1P09055 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms