Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Krt1P04104 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.41■□□□□ 0.54
Krt1P04104 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.41■□□□□ 0.54
Krt1P04104 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Krt1P04104 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt1P04104 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt1P04104 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Krt1P04104 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Krt1P04104 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt1P04104 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt1P04104 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
Krt1P04104 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Krt1P04104 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.4■□□□□ 0.54
Krt1P04104 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Krt1P04104 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Krt1P04104 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt1P04104 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Krt1P04104 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt1P04104 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt1P04104 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt1P04104 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.39■□□□□ 0.53
Krt1P04104 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt1P04104 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Krt1P04104 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt1P04104 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.38■□□□□ 0.53
Krt1P04104 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt1P04104 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt1P04104 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt1P04104 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt1P04104 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.38■□□□□ 0.53
Krt1P04104 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.38■□□□□ 0.53
Krt1P04104 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt1P04104 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Krt1P04104 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt1P04104 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt1P04104 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Krt1P04104 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Krt1P04104 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Krt1P04104 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.35■□□□□ 0.53
Krt1P04104 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.35■□□□□ 0.53
Krt1P04104 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt1P04104 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt1P04104 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.35■□□□□ 0.53
Krt1P04104 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Krt1P04104 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Krt1P04104 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Krt1P04104 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt1P04104 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt1P04104 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt1P04104 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.34■□□□□ 0.53
Krt1P04104 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt1P04104 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt1P04104 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Krt1P04104 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.34■□□□□ 0.53
Krt1P04104 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Krt1P04104 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt1P04104 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krt1P04104 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krt1P04104 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Krt1P04104 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Krt1P04104 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt1P04104 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Krt1P04104 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms