Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tulp3O88413 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.12■□□□□ 0.49
Tulp3O88413 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.12■□□□□ 0.49
Tulp3O88413 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tulp3O88413 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.11■□□□□ 0.49
Tulp3O88413 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.11■□□□□ 0.49
Tulp3O88413 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tulp3O88413 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tulp3O88413 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tulp3O88413 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tulp3O88413 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tulp3O88413 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tulp3O88413 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.09■□□□□ 0.49
Tulp3O88413 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tulp3O88413 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tulp3O88413 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tulp3O88413 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Tulp3O88413 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tulp3O88413 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Tulp3O88413 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tulp3O88413 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Tulp3O88413 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tulp3O88413 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tulp3O88413 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tulp3O88413 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tulp3O88413 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tulp3O88413 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.07■□□□□ 0.48
Tulp3O88413 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.07■□□□□ 0.48
Tulp3O88413 Gm9870-201ENSMUST00000063874 645 ntBASIC18.07■□□□□ 0.48
Tulp3O88413 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tulp3O88413 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tulp3O88413 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
Tulp3O88413 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Tulp3O88413 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.06■□□□□ 0.48
Tulp3O88413 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.06■□□□□ 0.48
Tulp3O88413 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.06■□□□□ 0.48
Tulp3O88413 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tulp3O88413 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.06■□□□□ 0.48
Tulp3O88413 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tulp3O88413 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tulp3O88413 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Tulp3O88413 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.05■□□□□ 0.48
Tulp3O88413 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tulp3O88413 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.05■□□□□ 0.48
Tulp3O88413 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tulp3O88413 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.05■□□□□ 0.48
Tulp3O88413 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tulp3O88413 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Tulp3O88413 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.05■□□□□ 0.48
Tulp3O88413 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms