Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 AC242852.2-201ENST00000615738 1807 ntBASIC21.81■■□□□ 1.08
NDUFS3O75489 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.81■■□□□ 1.08
NDUFS3O75489 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.81■■□□□ 1.08
NDUFS3O75489 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.81■■□□□ 1.08
NDUFS3O75489 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDUFS3O75489 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
NDUFS3O75489 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.8■■□□□ 1.08
NDUFS3O75489 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.8■■□□□ 1.08
NDUFS3O75489 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 SYT6-210ENST00000641643 1587 ntBASIC21.8■■□□□ 1.08
NDUFS3O75489 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.8■■□□□ 1.08
NDUFS3O75489 DUX4L19-201ENST00000557448 1267 ntBASIC21.8■■□□□ 1.08
NDUFS3O75489 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NDUFS3O75489 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.8■■□□□ 1.08
NDUFS3O75489 ECEL1P1-201ENST00000373592 1742 ntBASIC21.8■■□□□ 1.08
NDUFS3O75489 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.8■■□□□ 1.08
NDUFS3O75489 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDUFS3O75489 PKD1P6-201ENST00000343738 4769 ntBASIC21.79■■□□□ 1.08
NDUFS3O75489 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFS3O75489 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.79■■□□□ 1.08
NDUFS3O75489 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFS3O75489 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.79■■□□□ 1.08
NDUFS3O75489 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFS3O75489 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFS3O75489 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDUFS3O75489 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
NDUFS3O75489 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NDUFS3O75489 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
NDUFS3O75489 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
NDUFS3O75489 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NDUFS3O75489 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 AL136116.3-201ENST00000402907 1138 ntBASIC21.78■■□□□ 1.08
NDUFS3O75489 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.78■■□□□ 1.08
NDUFS3O75489 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NDUFS3O75489 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 EP400NL-214ENST00000641289 2402 ntBASIC21.78■■□□□ 1.08
NDUFS3O75489 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDUFS3O75489 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.78■■□□□ 1.08
NDUFS3O75489 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDUFS3O75489 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDUFS3O75489 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
NDUFS3O75489 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDUFS3O75489 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDUFS3O75489 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
NDUFS3O75489 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NDUFS3O75489 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NDUFS3O75489 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
NDUFS3O75489 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NDUFS3O75489 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NDUFS3O75489 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.76■■□□□ 1.07
NDUFS3O75489 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.76■■□□□ 1.07
NDUFS3O75489 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NDUFS3O75489 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFS3O75489 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFS3O75489 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NDUFS3O75489 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.76■■□□□ 1.07
NDUFS3O75489 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.76■■□□□ 1.07
NDUFS3O75489 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
NDUFS3O75489 LINC00526-201ENST00000581067 1875 ntBASIC21.76■■□□□ 1.07
NDUFS3O75489 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFS3O75489 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFS3O75489 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.76■■□□□ 1.07
NDUFS3O75489 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFS3O75489 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NDUFS3O75489 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDUFS3O75489 AC080038.3-201ENST00000623346 1952 ntBASIC21.76■■□□□ 1.07
NDUFS3O75489 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
NDUFS3O75489 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NDUFS3O75489 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
NDUFS3O75489 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NDUFS3O75489 SERBP1P1-201ENST00000396021 1160 ntBASIC21.75■■□□□ 1.07
NDUFS3O75489 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
NDUFS3O75489 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.75■■□□□ 1.07
NDUFS3O75489 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.75■■□□□ 1.07
NDUFS3O75489 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NDUFS3O75489 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.75■■□□□ 1.07
NDUFS3O75489 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDUFS3O75489 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.74■■□□□ 1.07
NDUFS3O75489 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NDUFS3O75489 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
NDUFS3O75489 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NDUFS3O75489 AL138724.1-201ENST00000606771 1088 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms