Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pfdn2O70591 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pfdn2O70591 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.11■□□□□ 0.17
Pfdn2O70591 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pfdn2O70591 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.11■□□□□ 0.17
Pfdn2O70591 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.11■□□□□ 0.17
Pfdn2O70591 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.11■□□□□ 0.17
Pfdn2O70591 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.11■□□□□ 0.17
Pfdn2O70591 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pfdn2O70591 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Pfdn2O70591 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pfdn2O70591 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pfdn2O70591 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Pfdn2O70591 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.09■□□□□ 0.17
Pfdn2O70591 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pfdn2O70591 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pfdn2O70591 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pfdn2O70591 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pfdn2O70591 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pfdn2O70591 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Pfdn2O70591 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pfdn2O70591 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.08■□□□□ 0.16
Pfdn2O70591 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.08■□□□□ 0.16
Pfdn2O70591 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Pfdn2O70591 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pfdn2O70591 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.07■□□□□ 0.16
Pfdn2O70591 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Gm45444-201ENSMUST00000211394 898 ntBASIC16.07■□□□□ 0.16
Pfdn2O70591 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.07■□□□□ 0.16
Pfdn2O70591 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.07■□□□□ 0.16
Pfdn2O70591 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pfdn2O70591 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pfdn2O70591 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pfdn2O70591 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pfdn2O70591 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pfdn2O70591 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pfdn2O70591 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pfdn2O70591 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.05■□□□□ 0.16
Pfdn2O70591 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pfdn2O70591 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.05■□□□□ 0.16
Pfdn2O70591 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pfdn2O70591 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms