Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pdlim3O70209 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.61■□□□□ 0.41
Pdlim3O70209 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim3O70209 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pdlim3O70209 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pdlim3O70209 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.6■□□□□ 0.41
Pdlim3O70209 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.6■□□□□ 0.41
Pdlim3O70209 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.6■□□□□ 0.41
Pdlim3O70209 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pdlim3O70209 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim3O70209 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim3O70209 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim3O70209 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim3O70209 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Pdlim3O70209 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pdlim3O70209 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pdlim3O70209 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim3O70209 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Pdlim3O70209 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim3O70209 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim3O70209 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pdlim3O70209 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
Pdlim3O70209 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim3O70209 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.58■□□□□ 0.4
Pdlim3O70209 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim3O70209 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim3O70209 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.58■□□□□ 0.4
Pdlim3O70209 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pdlim3O70209 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim3O70209 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pdlim3O70209 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim3O70209 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pdlim3O70209 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.57■□□□□ 0.4
Pdlim3O70209 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim3O70209 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim3O70209 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim3O70209 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim3O70209 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim3O70209 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pdlim3O70209 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pdlim3O70209 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.57■□□□□ 0.4
Pdlim3O70209 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.56■□□□□ 0.4
Pdlim3O70209 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.56■□□□□ 0.4
Pdlim3O70209 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pdlim3O70209 Etf1-202ENSMUST00000180351 108 ntBASIC17.56■□□□□ 0.4
Pdlim3O70209 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.56■□□□□ 0.4
Pdlim3O70209 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pdlim3O70209 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pdlim3O70209 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.56■□□□□ 0.4
Pdlim3O70209 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pdlim3O70209 AA386476-201ENSMUST00000098781 1665 ntBASIC17.55■□□□□ 0.4
Pdlim3O70209 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim3O70209 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim3O70209 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.55■□□□□ 0.4
Pdlim3O70209 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pdlim3O70209 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Pdlim3O70209 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim3O70209 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.54■□□□□ 0.4
Pdlim3O70209 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim3O70209 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pdlim3O70209 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pdlim3O70209 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pdlim3O70209 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms