Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Kcnu1O54982 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kcnu1O54982 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Kcnu1O54982 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Kcnu1O54982 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Kcnu1O54982 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.73■□□□□ 0.91
Kcnu1O54982 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Serp2-204ENSMUST00000228055 705 ntBASIC20.73■□□□□ 0.91
Kcnu1O54982 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Kcnu1O54982 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Kcnu1O54982 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Kcnu1O54982 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Kcnu1O54982 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.72■□□□□ 0.91
Kcnu1O54982 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.72■□□□□ 0.91
Kcnu1O54982 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.72■□□□□ 0.91
Kcnu1O54982 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Kcnu1O54982 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Kcnu1O54982 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Kcnu1O54982 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Kcnu1O54982 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.72■□□□□ 0.91
Kcnu1O54982 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Kcnu1O54982 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Kcnu1O54982 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Kcnu1O54982 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Kcnu1O54982 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Kcnu1O54982 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.71■□□□□ 0.91
Kcnu1O54982 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.7■□□□□ 0.9
Kcnu1O54982 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Kcnu1O54982 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Kcnu1O54982 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.7■□□□□ 0.9
Kcnu1O54982 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Kcnu1O54982 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Kcnu1O54982 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Kcnu1O54982 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Kcnu1O54982 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Gm12251-201ENSMUST00000117893 792 ntBASIC20.69■□□□□ 0.9
Kcnu1O54982 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Kcnu1O54982 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Gm43137-201ENSMUST00000198052 594 ntBASIC20.69■□□□□ 0.9
Kcnu1O54982 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Kcnu1O54982 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Kcnu1O54982 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Kcnu1O54982 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Kcnu1O54982 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Kcnu1O54982 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.67■□□□□ 0.9
Kcnu1O54982 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.67■□□□□ 0.9
Kcnu1O54982 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Kcnu1O54982 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kcnu1O54982 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Kcnu1O54982 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Kcnu1O54982 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.66■□□□□ 0.9
Kcnu1O54982 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Kcnu1O54982 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms