Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Slc1a6O35544 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc1a6O35544 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Slc1a6O35544 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc1a6O35544 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc1a6O35544 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Slc1a6O35544 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Slc1a6O35544 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Slc1a6O35544 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a6O35544 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc1a6O35544 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a6O35544 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a6O35544 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.14■□□□□ 0.65
Slc1a6O35544 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a6O35544 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc1a6O35544 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.14■□□□□ 0.65
Slc1a6O35544 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc1a6O35544 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.13■□□□□ 0.65
Slc1a6O35544 Etf1-202ENSMUST00000180351 108 ntBASIC19.13■□□□□ 0.65
Slc1a6O35544 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Slc1a6O35544 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Slc1a6O35544 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Slc1a6O35544 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Slc1a6O35544 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.12■□□□□ 0.65
Slc1a6O35544 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.12■□□□□ 0.65
Slc1a6O35544 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.12■□□□□ 0.65
Slc1a6O35544 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Slc1a6O35544 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 BC021767-201ENSMUST00000126387 1716 ntBASIC19.11■□□□□ 0.65
Slc1a6O35544 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Slc1a6O35544 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a6O35544 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a6O35544 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a6O35544 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a6O35544 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a6O35544 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Slc1a6O35544 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Slc1a6O35544 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.1■□□□□ 0.65
Slc1a6O35544 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Slc1a6O35544 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.09■□□□□ 0.65
Slc1a6O35544 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.09■□□□□ 0.65
Slc1a6O35544 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.09■□□□□ 0.65
Slc1a6O35544 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Slc1a6O35544 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.09■□□□□ 0.65
Slc1a6O35544 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.09■□□□□ 0.65
Slc1a6O35544 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Slc1a6O35544 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Slc1a6O35544 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc1a6O35544 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc1a6O35544 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc1a6O35544 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc1a6O35544 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc1a6O35544 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc1a6O35544 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Slc1a6O35544 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc1a6O35544 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc1a6O35544 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc1a6O35544 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc1a6O35544 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc1a6O35544 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms