Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Slc4a9E9PUP3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.79■■□□□ 1.24
Slc4a9E9PUP3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Slc4a9E9PUP3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.79■■□□□ 1.24
Slc4a9E9PUP3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Slc4a9E9PUP3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Slc4a9E9PUP3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Slc4a9E9PUP3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Slc4a9E9PUP3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Slc4a9E9PUP3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Dio3-201ENSMUST00000097228 1449 ntBASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Slc4a9E9PUP3 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Gm10698-201ENSMUST00000182663 604 ntBASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc4a9E9PUP3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Slc4a9E9PUP3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc4a9E9PUP3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Mir1199-201ENSMUST00000117015 119 ntBASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc4a9E9PUP3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Gm18666-201ENSMUST00000190039 958 ntBASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Gm10819-201ENSMUST00000099988 561 ntBASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Slc4a9E9PUP3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc4a9E9PUP3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms