Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx6-2D3Z4R4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.82■□□□□ 0.12
Nkx6-2D3Z4R4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx6-2D3Z4R4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.8■□□□□ 0.12
Nkx6-2D3Z4R4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Mir3960-201ENSMUST00000198213 73 ntBASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Nkx6-2D3Z4R4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx6-2D3Z4R4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-2D3Z4R4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.77■□□□□ 0.12
Nkx6-2D3Z4R4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-2D3Z4R4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
Nkx6-2D3Z4R4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nkx6-2D3Z4R4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms