Protein–RNA interactions for Protein: A0A1D5RMN0

Tnip3, TNFAIP3-interacting protein 3, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnip3A0A1D5RMN0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnip3A0A1D5RMN0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnip3A0A1D5RMN0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnip3A0A1D5RMN0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnip3A0A1D5RMN0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnip3A0A1D5RMN0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnip3A0A1D5RMN0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnip3A0A1D5RMN0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tnip3A0A1D5RMN0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tnip3A0A1D5RMN0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Tnip3A0A1D5RMN0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnip3A0A1D5RMN0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnip3A0A1D5RMN0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnip3A0A1D5RMN0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms