Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm7417-201ENSMUST00000192950 473 ntBASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv29A0A0G2LB96 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv29A0A0G2LB96 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.11■□□□□ 0.17
Trbv29A0A0G2LB96 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv29A0A0G2LB96 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Gm15820-201ENSMUST00000201566 728 ntBASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv29A0A0G2LB96 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv29A0A0G2LB96 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv29A0A0G2LB96 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv29A0A0G2LB96 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv29A0A0G2LB96 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms