Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gm40881-201ENSMUST00000223397 166 ntBASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav13d-4A0A0G2JFX3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Mir6236-201ENSMUST00000184437 123 ntBASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms