Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-2A0A0G2JF93 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-2A0A0G2JF93 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13n-2A0A0G2JF93 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13n-2A0A0G2JF93 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Rarb-207ENSMUST00000225921 2756 ntBASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-2A0A0G2JF93 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13n-2A0A0G2JF93 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13n-2A0A0G2JF93 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-2A0A0G2JF93 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm11687-201ENSMUST00000118911 886 ntBASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13n-2A0A0G2JF93 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-2A0A0G2JF93 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms