Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-3A0A0B4J1K1 BC021767-201ENSMUST00000126387 1716 ntBASIC13.27□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-3A0A0B4J1K1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-3A0A0B4J1K1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-3A0A0B4J1K1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-3A0A0B4J1K1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm9806-201ENSMUST00000051080 552 ntBASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4-3A0A0B4J1K1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4-3A0A0B4J1K1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4-3A0A0B4J1K1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms