Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 BC021767-201ENSMUST00000126387 1716 ntBASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trbv2A0A0B4J1G8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trbv2A0A0B4J1G8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv2A0A0B4J1G8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv2A0A0B4J1G8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.27■□□□□ 0.36
Trbv2A0A0B4J1G8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trbv2A0A0B4J1G8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
Trbv2A0A0B4J1G8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Trbv2A0A0B4J1G8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv2A0A0B4J1G8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.27■□□□□ 0.35
Trbv2A0A0B4J1G8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trbv2A0A0B4J1G8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv2A0A0B4J1G8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv2A0A0B4J1G8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trbv2A0A0B4J1G8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Etf1-202ENSMUST00000180351 108 ntBASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.25■□□□□ 0.35
Trbv2A0A0B4J1G8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trbv2A0A0B4J1G8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trbv2A0A0B4J1G8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trbv2A0A0B4J1G8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trbv2A0A0B4J1G8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trbv2A0A0B4J1G8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trbv2A0A0B4J1G8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms