Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav8-1A0A075B641 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav8-1A0A075B641 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav8-1A0A075B641 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Scarna2-201ENSMUST00000157560 414 ntBASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Gm9806-201ENSMUST00000051080 552 ntBASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8-1A0A075B641 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8-1A0A075B641 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.9□□□□□ -0.19
Trav8-1A0A075B641 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8-1A0A075B641 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms