Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Gm45102-201ENSMUST00000207427 857 ntBASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav9-1A0A075B601 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav9-1A0A075B601 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav9-1A0A075B601 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9-1A0A075B601 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9-1A0A075B601 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9-1A0A075B601 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9-1A0A075B601 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms