Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-1A0A075B5Z8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-1A0A075B5Z8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-1A0A075B5Z8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-1A0A075B5Z8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 BC021767-201ENSMUST00000126387 1716 ntBASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-1A0A075B5Z8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav6-1A0A075B5Z8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-1A0A075B5Z8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-1A0A075B5Z8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav6-1A0A075B5Z8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms