Protein–RNA interactions for Protein: A0A075B5V5

Ighv1-39, Immunoglobulin heavy variable 1-39 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-39A0A075B5V5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.29■□□□□ 0.04
Ighv1-39A0A075B5V5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ighv1-39A0A075B5V5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-39A0A075B5V5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-39A0A075B5V5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Ighv1-39A0A075B5V5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-39A0A075B5V5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-39A0A075B5V5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-39A0A075B5V5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-39A0A075B5V5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-39A0A075B5V5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-39A0A075B5V5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-39A0A075B5V5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-39A0A075B5V5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-39A0A075B5V5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-39A0A075B5V5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Golph3-205ENSMUST00000228671 2842 ntBASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-39A0A075B5V5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-39A0A075B5V5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-39A0A075B5V5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms