Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clcn2Q9R0A1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.92■□□□□ 0.78
Clcn2Q9R0A1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn2Q9R0A1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn2Q9R0A1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Clcn2Q9R0A1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.91■□□□□ 0.78
Clcn2Q9R0A1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.91■□□□□ 0.78
Clcn2Q9R0A1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clcn2Q9R0A1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clcn2Q9R0A1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clcn2Q9R0A1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn2Q9R0A1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn2Q9R0A1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn2Q9R0A1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Clcn2Q9R0A1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clcn2Q9R0A1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.87■□□□□ 0.77
Clcn2Q9R0A1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Gm43530-201ENSMUST00000195920 274 ntBASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clcn2Q9R0A1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clcn2Q9R0A1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clcn2Q9R0A1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn2Q9R0A1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn2Q9R0A1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.83■□□□□ 0.77
Clcn2Q9R0A1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clcn2Q9R0A1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Clcn2Q9R0A1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms