Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nrip3Q9JJR9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nrip3Q9JJR9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nrip3Q9JJR9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nrip3Q9JJR9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nrip3Q9JJR9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nrip3Q9JJR9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 Gm9870-201ENSMUST00000063874 645 ntBASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.63■□□□□ 0.41
Nrip3Q9JJR9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nrip3Q9JJR9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nrip3Q9JJR9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nrip3Q9JJR9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nrip3Q9JJR9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms