Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Calr3Q9D9Q6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Calr3Q9D9Q6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Calr3Q9D9Q6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Calr3Q9D9Q6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Calr3Q9D9Q6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
Calr3Q9D9Q6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Calr3Q9D9Q6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Calr3Q9D9Q6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Calr3Q9D9Q6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.08■□□□□ 0.81
Calr3Q9D9Q6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Calr3Q9D9Q6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Calr3Q9D9Q6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Calr3Q9D9Q6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calr3Q9D9Q6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calr3Q9D9Q6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calr3Q9D9Q6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calr3Q9D9Q6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calr3Q9D9Q6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Mir6236-201ENSMUST00000184437 123 ntBASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calr3Q9D9Q6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calr3Q9D9Q6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.04■□□□□ 0.8
Calr3Q9D9Q6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calr3Q9D9Q6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calr3Q9D9Q6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms