Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.79■□□□□ 0.76
Sf3a3Q9D554 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sf3a3Q9D554 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sf3a3Q9D554 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.77■□□□□ 0.75
Sf3a3Q9D554 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a3Q9D554 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sf3a3Q9D554 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Sf3a3Q9D554 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Sf3a3Q9D554 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sf3a3Q9D554 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sf3a3Q9D554 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sf3a3Q9D554 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sf3a3Q9D554 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.71■□□□□ 0.75
Sf3a3Q9D554 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms