Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk9Q99J95 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk9Q99J95 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk9Q99J95 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk9Q99J95 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.59■□□□□ 0.73
Cdk9Q99J95 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk9Q99J95 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.59■□□□□ 0.73
Cdk9Q99J95 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk9Q99J95 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk9Q99J95 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk9Q99J95 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cdk9Q99J95 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
Cdk9Q99J95 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk9Q99J95 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk9Q99J95 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk9Q99J95 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cdk9Q99J95 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk9Q99J95 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk9Q99J95 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk9Q99J95 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.56■□□□□ 0.72
Cdk9Q99J95 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.56■□□□□ 0.72
Cdk9Q99J95 Gm15546-201ENSMUST00000122095 826 ntBASIC19.56■□□□□ 0.72
Cdk9Q99J95 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.56■□□□□ 0.72
Cdk9Q99J95 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk9Q99J95 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk9Q99J95 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.54■□□□□ 0.72
Cdk9Q99J95 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk9Q99J95 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdk9Q99J95 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cdk9Q99J95 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms