Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thumpd1Q99J36 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Gm10232-201ENSMUST00000089221 720 ntBASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thumpd1Q99J36 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Thumpd1Q99J36 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd1Q99J36 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd1Q99J36 Gm43530-201ENSMUST00000195920 274 ntBASIC17.39■□□□□ 0.37
Thumpd1Q99J36 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Thumpd1Q99J36 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Thumpd1Q99J36 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Thumpd1Q99J36 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Gm13238-201ENSMUST00000117655 780 ntBASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.37■□□□□ 0.37
Thumpd1Q99J36 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Thumpd1Q99J36 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Golph3-205ENSMUST00000228671 2842 ntBASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Thumpd1Q99J36 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Gm40881-201ENSMUST00000223397 166 ntBASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Gm5921-201ENSMUST00000075898 882 ntBASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Thumpd1Q99J36 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thumpd1Q99J36 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Thumpd1Q99J36 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.33■□□□□ 0.37
Thumpd1Q99J36 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Thumpd1Q99J36 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms