Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh18Q8VHR0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh18Q8VHR0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh18Q8VHR0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdh18Q8VHR0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh18Q8VHR0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh18Q8VHR0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh18Q8VHR0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh18Q8VHR0 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh18Q8VHR0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdh18Q8VHR0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh18Q8VHR0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh18Q8VHR0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh18Q8VHR0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Gm40881-201ENSMUST00000223397 166 ntBASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh18Q8VHR0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms