Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Slf1Q8R3P9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.7■□□□□ 0.74
Slf1Q8R3P9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slf1Q8R3P9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slf1Q8R3P9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.67■□□□□ 0.74
Slf1Q8R3P9 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.66■□□□□ 0.74
Slf1Q8R3P9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.66■□□□□ 0.74
Slf1Q8R3P9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slf1Q8R3P9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slf1Q8R3P9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slf1Q8R3P9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slf1Q8R3P9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Slf1Q8R3P9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slf1Q8R3P9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slf1Q8R3P9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slf1Q8R3P9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slf1Q8R3P9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slf1Q8R3P9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms