Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.5■■□□□ 1.03
Sox30Q8CGW4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sox30Q8CGW4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sox30Q8CGW4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.48■■□□□ 1.03
Sox30Q8CGW4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.48■■□□□ 1.03
Sox30Q8CGW4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.48■■□□□ 1.03
Sox30Q8CGW4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sox30Q8CGW4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.46■■□□□ 1.03
Sox30Q8CGW4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Sox30Q8CGW4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.45■■□□□ 1.03
Sox30Q8CGW4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sox30Q8CGW4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sox30Q8CGW4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Gm7417-201ENSMUST00000192950 473 ntBASIC21.43■■□□□ 1.02
Sox30Q8CGW4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sox30Q8CGW4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.42■■□□□ 1.02
Sox30Q8CGW4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms