Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Hist3h2bbQ8CGP0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hist3h2bbQ8CGP0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hist3h2bbQ8CGP0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.86□□□□□ -0.03
Hist3h2bbQ8CGP0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hist3h2bbQ8CGP0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.84□□□□□ -0.03
Hist3h2bbQ8CGP0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist3h2bbQ8CGP0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist3h2bbQ8CGP0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hist3h2bbQ8CGP0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms