Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.82■□□□□ 0.76
Rfx6Q8C7R7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rfx6Q8C7R7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rfx6Q8C7R7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rfx6Q8C7R7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.78■□□□□ 0.76
Rfx6Q8C7R7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.77■□□□□ 0.76
Rfx6Q8C7R7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rfx6Q8C7R7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rfx6Q8C7R7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms